LabOps Instrument Panel
RNA workbench Bridge index
Knob Controls
Drag up/down: rotate + illuminate upstream impact paths.
Scroll wheel: fine adjustment.
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Impact Flow
MSA Embed Evo Struct Output Recycle
ParameterPrimary pathSecondary
d_modelMSA -> Embed -> Evobroad downstream
n_headsEvo -> Structstrong
n_layersEvo full stackmoderate struct
recyclingrecycle loopStruct -> Output
lrEvo + trainingwide, nonlinear

Geometry Contract

Implemented: Nussinov DP (O(n³), WC+GU), Frenet-style backbone evolution, Vietoris-Rips filtration sweep, 4-type graph edge encoding.
Interaction invariant: sequence selection is synchronized across secondary/3D/TDA/action views.
Next wire: external 3D predictor as coordinate source and direct VR fingerprint refresh.
coords = protenix_pred(seq, use_rna_msa=True, seeds=[101,102,103])
h0,h1,betti = vr_persistence(coords, eps_max=40, steps=60)
node_feats = [one_hot(nt), confidence[i], coords[i]]
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Recombination Playground

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Inline RNA Structure Instrument